Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs13212936 | chr6:25588815 | C/T | 7.71E-9 | 210 | 15.88 | 19.5 | 4.67 | KM Plot |
| KIRP | rs13213152 | chr6:28349698 | A/G | 2.08E-7 | 211 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13213986 | chr6:28358009 | T/A | 2.08E-7 | 211 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13214023 | chr6:28332141 | A/G | 3.97E-7 | 214 | 4.88 | 12.85 | 16.5 | KM Plot |
| KIRP | rs13215275 | chr6:27647509 | G/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13215825 | chr6:11731887 | A/C | 8.01E-9 | 214 | 14.97 | 20.12 | 6.4 | KM Plot |
| KIRP | rs13216117 | chr6:27938484 | A/G | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13216828 | chr6:26373507 | G/A | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13217472 | chr6:28681415 | G/A | 4.09E-7 | 207 | 15.88 | 10.25 | 9.77 | KM Plot |
| KIRP | rs13217619 | chr6:28306671 | T/C | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13217984 | chr6:28139710 | A/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13218875 | chr6:27884012 | C/T | 5.53E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13220495 | chr6:26441640 | C/T | 1.99E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13220522 | chr6:26316295 | G/A | 2.23E-7 | 212 | 15.2 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13269963 | chr8:27400604 | C/T | 2.1E-5 | 209 | 17.02 | 13.6 | 3.43 | KM Plot |